plot_state_lifetime
Plot the lifetime autocorrelation function of discrete states as function of lag time.
Todo
Finish docstring
This script is designed to plot the output of
scripts.discretization.state_lifetime
.
Options
- -f
Input filename. The output file of
scripts.discretization.state_lifetime
.- -o
Output filename.
- --xlim
Left and right limit of the x-axis in data coordinates. If the right limit is
None
, plot until the maximum lag time. Default:[0, None]
.- --ylim
Lower and upper limit of the y-axis in data coordinates. Pass ‘None’ to adjust the limit(s) automatically. Default:
[0, 1]
.- --time-conv
Multiply all times by this factor. Default:
1
.- --time-unit
Time unit. Default:
'steps'
.
See also
plot_state_lifetime_discrete
Plot the lifetime autocorrelation function of discrete states as function of another set of discrete states
Examples
TODO